This function sends a GET request to the UniProt REST API and retrieves data based on the provided UniProt accession number.
Examples
# Example usage
# \donttest{
result <- retrieve_uniprot_data("O88737")
#> ℹ Sending request to UniProt for accession: O88737
#> ✔ Successfully retrieved data for O88737
print(result)
#> $entryType
#> [1] "UniProtKB reviewed (Swiss-Prot)"
#>
#> $primaryAccession
#> [1] "O88737"
#>
#> $secondaryAccessions
#> [1] "E9QMZ3" "Q6ZQB5"
#>
#> $uniProtkbId
#> [1] "BSN_MOUSE"
#>
#> $entryAudit
#> $entryAudit$firstPublicDate
#> [1] "2004-08-16"
#>
#> $entryAudit$lastAnnotationUpdateDate
#> [1] "2026-01-28"
#>
#> $entryAudit$lastSequenceUpdateDate
#> [1] "2011-07-27"
#>
#> $entryAudit$entryVersion
#> [1] 179
#>
#> $entryAudit$sequenceVersion
#> [1] 4
#>
#>
#> $annotationScore
#> [1] 5
#>
#> $organism
#> $organism$scientificName
#> [1] "Mus musculus"
#>
#> $organism$commonName
#> [1] "Mouse"
#>
#> $organism$taxonId
#> [1] 10090
#>
#> $organism$lineage
#> [1] "Eukaryota" "Metazoa" "Chordata" "Craniata"
#> [5] "Vertebrata" "Euteleostomi" "Mammalia" "Eutheria"
#> [9] "Euarchontoglires" "Glires" "Rodentia" "Myomorpha"
#> [13] "Muroidea" "Muridae" "Murinae" "Mus"
#> [17] "Mus"
#>
#>
#> $proteinExistence
#> [1] "1: Evidence at protein level"
#>
#> $proteinDescription
#> $proteinDescription$recommendedName
#> $proteinDescription$recommendedName$fullName
#> $proteinDescription$recommendedName$fullName$evidences
#> evidenceCode source id
#> 1 ECO:0000303 PubMed 9679147
#> 2 ECO:0000305 <NA> <NA>
#>
#> $proteinDescription$recommendedName$fullName$value
#> [1] "Protein bassoon"
#>
#>
#>
#>
#> $genes
#> geneName.evidences geneName.value synonyms
#> 1 ECO:0000312, MGI, MGI:1277955 Bsn Kiaa0434
#>
#> $comments
#> texts
#> 1 ECO:0000250, ECO:0000250, ECO:0000250, ECO:0000269, ECO:0000269, ECO:0000269, ECO:0000269, UniProtKB, UniProtKB, UniProtKB, PubMed, PubMed, PubMed, PubMed, O35078, O88778, Q9UPA5, 12628168, 12628169, 19812333, 28231469, Scaffold protein of the presynaptic cytomatrix at the active zone (CAZ) which is the place in the synapse where neurotransmitter is released (PubMed:12628168, PubMed:12628169, PubMed:19812333). After synthesis, participates in the formation of Golgi-derived membranous organelles termed Piccolo-Bassoon transport vesicles (PTVs) that are transported along axons to sites of nascent synaptic contacts (By similarity). At the presynaptic active zone, regulates the spatial organization of synaptic vesicle cluster, the protein complexes that execute membrane fusion and compensatory endocytosis (By similarity). Also functions in processes other than assembly such as the regulation of specific presynaptic protein ubiquitination by interacting with SIAH1 or the regulation of presynaptic autophagy by associating with ATG5 (By similarity) (PubMed:28231469). Also mediates synapse to nucleus communication leading to reconfiguration of gene expression by associating with the transcriptional corepressor CTBP1 and by subsequently reducing the size of its pool available for nuclear import (By similarity). Inhibits the activity of the proportion of DAO enzyme that localizes to the presynaptic active zone, which may modulate synaptic transmission (By similarity)
#> 2 ECO:0000250, ECO:0000250, ECO:0000269, ECO:0000269, ECO:0000269, UniProtKB, UniProtKB, PubMed, PubMed, PubMed, O88778, Q9UPA5, 17869247, 19812333, 28231469, Interacts with PCLO, ERC2/CAST1, RIMS1 and UNC13A (PubMed:19812333). Interacts with TPRG1L (PubMed:17869247). Interacts with DYNLL1 and DYNLL2; these interactions potentially link PTVs to dynein and myosin V motor complexes (By similarity). Interacts with ATG5; this interaction is important for the regulation of presynaptic autophagy (PubMed:28231469). Interacts (via C-terminus) with TRIO (via N-terminus) (By similarity). Interacts with CTBP1 (By similarity). Interacts with SIAH1; this interaction negatively regulates SIAH1 E3 ligase activity (By similarity). Interacts (via coiled region) with DAO; the interaction is direct (By similarity)
#> 3 NULL
#> 4 NULL
#> 5 ECO:0000269, ECO:0000269, ECO:0000269, PubMed, PubMed, PubMed, 12628168, 12628169, 19812333, Expressed in brain and retina
#> 6 ECO:0000250, Myristoylated. The N-terminal myristoylation is not sufficient for presynaptic localization (By similarity)
#> 7 ECO:0000269, ECO:0000269, PubMed, PubMed, 12628168, 28231469, Mice show a reduced excitability attributed to inactivation of a fraction of brain glutamatergic synapses. At these synapses, vesicles are clustered and docked in normal numbers, but were unable to fuse. In retina, mutants lacking functional BSN showed normal retinal anatomy, but synapses lacked anchoring of the photoreceptor ribbon to the presynaptic active zone resulting in impaired photoreceptor synaptic transmission (PubMed:12628168). Knockdown of both Bassoon/BSN and Piccolo/PCLO leads to the formation of presynaptic autophagosomes
#> 8 ECO:0000305, Incompl
#> commentType
#> 1 FUNCTION
#> 2 SUBUNIT
#> 3 SUBCELLULAR LOCATION
#> 4 ALTERNATIVE PRODUCTS
#> 5 TISSUE SPECIFICITY
#> 6 PTM
#> 7 DISRUPTION PHENOTYPE
#> 8 MISCELLANEOUS
#> texts
#> 1 NULL
#> 2 NULL
#> 3 ECO:0000250, UniProtKB, O88778, In retina, is localized in the outer plexiform layer at ribbon synapses formed by rods and cones but was absent from basal synaptic contacts formed by cones. In the retinal inner plexiform layer localized to conventional inhibitory GABAergic synapses, made by amacrine cells, but absent from the bipolar cell ribbon synapses (By similarity)
#> 4 NULL
#> 5 NULL
#> 6 NULL
#> 7 NULL
#> 8 NULL
#> subcellularLocations
#> 1 NULL
#> 2 NULL
#> 3 ECO:0000250, UniProtKB, O88778, ECO:0000269, ECO:0000269, PubMed, PubMed, 12628168, 12628169, ECO:0000250, UniProtKB, O88778, ECO:0000269, PubMed, 12628169, Cytoplasm, Presynaptic active zone, Cytoplasm, cytoskeleton, Cytoplasmic vesicle, secretory vesicle, synaptic vesicle membrane, SL-0086, SL-0519, SL-0090, SL-0260, ECO:0000250, UniProtKB, O88778, NA, NA, NA, Peripheral membrane protein, NA, NA, NA, SL-9903
#> 4 NULL
#> 5 NULL
#> 6 NULL
#> 7 NULL
#> 8 NULL
#> events
#> 1 NULL
#> 2 NULL
#> 3 NULL
#> 4 Alternative splicing
#> 5 NULL
#> 6 NULL
#> 7 NULL
#> 8 NULL
#> isoforms molecule
#> 1 NULL <NA>
#> 2 NULL <NA>
#> 3 NULL <NA>
#> 4 1, 2, O88737-1, O88737-2, Displayed, Described, VSP_011375 <NA>
#> 5 NULL <NA>
#> 6 NULL <NA>
#> 7 NULL <NA>
#> 8 NULL Isoform 2
#>
#> $features
#> type location.start.value location.start.modifier
#> 1 Initiator methionine 1 EXACT
#> 2 Chain 2 EXACT
#> 3 Repeat 570 EXACT
#> 4 Repeat 577 EXACT
#> 5 Repeat 584 EXACT
#> 6 Repeat 591 EXACT
#> 7 Repeat 598 EXACT
#> 8 Zinc finger 167 EXACT
#> 9 Zinc finger 195 EXACT
#> 10 Zinc finger 464 EXACT
#> 11 Zinc finger 492 EXACT
#> 12 Region 1 EXACT
#> 13 Region 62 EXACT
#> 14 Region 228 EXACT
#> 15 Region 362 EXACT
#> 16 Region 525 EXACT
#> 17 Region 570 EXACT
#> 18 Region 950 EXACT
#> 19 Region 1309 EXACT
#> 20 Region 1573 EXACT
#> 21 Region 1831 EXACT
#> 22 Region 1926 EXACT
#> 23 Region 2327 EXACT
#> 24 Region 2476 EXACT
#> 25 Region 2524 EXACT
#> 26 Region 2730 EXACT
#> 27 Region 2854 EXACT
#> 28 Region 3051 EXACT
#> 29 Region 3431 EXACT
#> 30 Region 3581 EXACT
#> 31 Coiled coil 2366 EXACT
#> 32 Coiled coil 2453 EXACT
#> 33 Compositional bias 9 EXACT
#> 34 Compositional bias 31 EXACT
#> 35 Compositional bias 53 EXACT
#> 36 Compositional bias 85 EXACT
#> 37 Compositional bias 127 EXACT
#> 38 Compositional bias 230 EXACT
#> 39 Compositional bias 362 EXACT
#> 40 Compositional bias 395 EXACT
#> 41 Compositional bias 528 EXACT
#> 42 Compositional bias 573 EXACT
#> 43 Compositional bias 632 EXACT
#> 44 Compositional bias 684 EXACT
#> 45 Compositional bias 694 EXACT
#> 46 Compositional bias 709 EXACT
#> 47 Compositional bias 787 EXACT
#> 48 Compositional bias 865 EXACT
#> 49 Compositional bias 895 EXACT
#> 50 Compositional bias 994 EXACT
#> 51 Compositional bias 1049 EXACT
#> 52 Compositional bias 1063 EXACT
#> 53 Compositional bias 1117 EXACT
#> 54 Compositional bias 1133 EXACT
#> 55 Compositional bias 1173 EXACT
#> 56 Compositional bias 1192 EXACT
#> 57 Compositional bias 1209 EXACT
#> 58 Compositional bias 1226 EXACT
#> 59 Compositional bias 1333 EXACT
#> 60 Compositional bias 1357 EXACT
#> 61 Compositional bias 1370 EXACT
#> 62 Compositional bias 1488 EXACT
#> 63 Compositional bias 1508 EXACT
#> 64 Compositional bias 1573 EXACT
#> 65 Compositional bias 1844 EXACT
#> 66 Compositional bias 2329 EXACT
#> 67 Compositional bias 2361 EXACT
#> 68 Compositional bias 2541 EXACT
#> 69 Compositional bias 2643 EXACT
#> 70 Compositional bias 3073 EXACT
#> 71 Compositional bias 3089 EXACT
#> 72 Compositional bias 3202 EXACT
#> 73 Compositional bias 3212 EXACT
#> 74 Compositional bias 3330 EXACT
#> 75 Compositional bias 3372 EXACT
#> 76 Compositional bias 3447 EXACT
#> 77 Compositional bias 3464 EXACT
#> 78 Compositional bias 3520 EXACT
#> 79 Compositional bias 3549 EXACT
#> 80 Compositional bias 3592 EXACT
#> 81 Compositional bias 3652 EXACT
#> 82 Compositional bias 3666 EXACT
#> 83 Compositional bias 3750 EXACT
#> 84 Compositional bias 3835 EXACT
#> 85 Compositional bias 3856 EXACT
#> 86 Modified residue 142 EXACT
#> 87 Modified residue 145 EXACT
#> 88 Modified residue 241 EXACT
#> 89 Modified residue 245 EXACT
#> 90 Modified residue 881 EXACT
#> 91 Modified residue 980 EXACT
#> 92 Modified residue 1050 EXACT
#> 93 Modified residue 1051 EXACT
#> 94 Modified residue 1100 EXACT
#> 95 Modified residue 1102 EXACT
#> 96 Modified residue 1108 EXACT
#> 97 Modified residue 1114 EXACT
#> 98 Modified residue 1236 EXACT
#> 99 Modified residue 1482 EXACT
#> 100 Modified residue 1491 EXACT
#> 101 Modified residue 1493 EXACT
#> 102 Modified residue 1792 EXACT
#> 103 Modified residue 1796 EXACT
#> 104 Modified residue 1806 EXACT
#> 105 Modified residue 1806 EXACT
#> 106 Modified residue 1818 EXACT
#> 107 Modified residue 1990 EXACT
#> 108 Modified residue 2046 EXACT
#> 109 Modified residue 2051 EXACT
#> 110 Modified residue 2081 EXACT
#> 111 Modified residue 2255 EXACT
#> 112 Modified residue 2265 EXACT
#> 113 Modified residue 2270 EXACT
#> 114 Modified residue 2578 EXACT
#> 115 Modified residue 2595 EXACT
#> 116 Modified residue 2622 EXACT
#> 117 Modified residue 2811 EXACT
#> 118 Modified residue 2860 EXACT
#> 119 Modified residue 2866 EXACT
#> 120 Modified residue 3022 EXACT
#> 121 Modified residue 3301 EXACT
#> 122 Modified residue 3382 EXACT
#> 123 Modified residue 3502 EXACT
#> 124 Modified residue 3823 EXACT
#> 125 Lipidation 2 EXACT
#> 126 Glycosylation 1354 EXACT
#> 127 Glycosylation 1395 EXACT
#> 128 Glycosylation 1707 EXACT
#> 129 Glycosylation 1934 EXACT
#> 130 Glycosylation 2318 EXACT
#> 131 Glycosylation 2524 EXACT
#> 132 Glycosylation 2700 EXACT
#> 133 Glycosylation 2945 EXACT
#> 134 Alternative sequence 2831 EXACT
#> 135 Sequence conflict 381 EXACT
#> 136 Sequence conflict 418 EXACT
#> 137 Sequence conflict 462 EXACT
#> 138 Sequence conflict 473 EXACT
#> 139 Sequence conflict 624 EXACT
#> 140 Sequence conflict 783 EXACT
#> 141 Sequence conflict 2292 EXACT
#> 142 Sequence conflict 2349 EXACT
#> 143 Sequence conflict 2892 EXACT
#> 144 Sequence conflict 3902 EXACT
#> location.end.value location.end.modifier
#> 1 1 EXACT
#> 2 3942 EXACT
#> 3 576 EXACT
#> 4 583 EXACT
#> 5 590 EXACT
#> 6 597 EXACT
#> 7 604 EXACT
#> 8 190 EXACT
#> 9 217 EXACT
#> 10 487 EXACT
#> 11 514 EXACT
#> 12 158 EXACT
#> 13 71 EXACT
#> 14 341 EXACT
#> 15 457 EXACT
#> 16 937 EXACT
#> 17 604 EXACT
#> 18 1258 EXACT
#> 19 1553 EXACT
#> 20 1625 EXACT
#> 21 1865 EXACT
#> 22 1977 EXACT
#> 23 2378 EXACT
#> 24 2504 EXACT
#> 25 2663 EXACT
#> 26 3278 EXACT
#> 27 2874 EXACT
#> 28 3409 EXACT
#> 29 3560 EXACT
#> 30 3917 EXACT
#> 31 2422 EXACT
#> 32 2483 EXACT
#> 33 29 EXACT
#> 34 52 EXACT
#> 35 71 EXACT
#> 36 98 EXACT
#> 37 154 EXACT
#> 38 240 EXACT
#> 39 379 EXACT
#> 40 407 EXACT
#> 41 541 EXACT
#> 42 600 EXACT
#> 43 645 EXACT
#> 44 693 EXACT
#> 45 708 EXACT
#> 46 718 EXACT
#> 47 802 EXACT
#> 48 876 EXACT
#> 49 905 EXACT
#> 50 1011 EXACT
#> 51 1062 EXACT
#> 52 1076 EXACT
#> 53 1132 EXACT
#> 54 1143 EXACT
#> 55 1190 EXACT
#> 56 1207 EXACT
#> 57 1219 EXACT
#> 58 1240 EXACT
#> 59 1343 EXACT
#> 60 1366 EXACT
#> 61 1438 EXACT
#> 62 1498 EXACT
#> 63 1522 EXACT
#> 64 1609 EXACT
#> 65 1856 EXACT
#> 66 2342 EXACT
#> 67 2378 EXACT
#> 68 2551 EXACT
#> 69 2655 EXACT
#> 70 3083 EXACT
#> 71 3114 EXACT
#> 72 3211 EXACT
#> 73 3237 EXACT
#> 74 3342 EXACT
#> 75 3391 EXACT
#> 76 3461 EXACT
#> 77 3487 EXACT
#> 78 3534 EXACT
#> 79 3560 EXACT
#> 80 3602 EXACT
#> 81 3665 EXACT
#> 82 3690 EXACT
#> 83 3820 EXACT
#> 84 3851 EXACT
#> 85 3891 EXACT
#> 86 142 EXACT
#> 87 145 EXACT
#> 88 241 EXACT
#> 89 245 EXACT
#> 90 881 EXACT
#> 91 980 EXACT
#> 92 1050 EXACT
#> 93 1051 EXACT
#> 94 1100 EXACT
#> 95 1102 EXACT
#> 96 1108 EXACT
#> 97 1114 EXACT
#> 98 1236 EXACT
#> 99 1482 EXACT
#> 100 1491 EXACT
#> 101 1493 EXACT
#> 102 1792 EXACT
#> 103 1796 EXACT
#> 104 1806 EXACT
#> 105 1806 EXACT
#> 106 1818 EXACT
#> 107 1990 EXACT
#> 108 2046 EXACT
#> 109 2051 EXACT
#> 110 2081 EXACT
#> 111 2255 EXACT
#> 112 2265 EXACT
#> 113 2270 EXACT
#> 114 2578 EXACT
#> 115 2595 EXACT
#> 116 2622 EXACT
#> 117 2811 EXACT
#> 118 2860 EXACT
#> 119 2866 EXACT
#> 120 3022 EXACT
#> 121 3301 EXACT
#> 122 3382 EXACT
#> 123 3502 EXACT
#> 124 3823 EXACT
#> 125 2 EXACT
#> 126 1354 EXACT
#> 127 1395 EXACT
#> 128 1707 EXACT
#> 129 1934 EXACT
#> 130 2318 EXACT
#> 131 2524 EXACT
#> 132 2700 EXACT
#> 133 2945 EXACT
#> 134 2889 EXACT
#> 135 381 EXACT
#> 136 418 EXACT
#> 137 462 EXACT
#> 138 473 EXACT
#> 139 626 EXACT
#> 140 783 EXACT
#> 141 2292 EXACT
#> 142 2349 EXACT
#> 143 2892 EXACT
#> 144 3902 EXACT
#> description
#> 1 Removed
#> 2 Protein bassoon
#> 3 1
#> 4 2
#> 5 3
#> 6 4
#> 7 5
#> 8 C4-type
#> 9 C4-type
#> 10 C4-type
#> 11 C4-type
#> 12 Disordered
#> 13 5 X 2 AA tandem repeats of P-G
#> 14 Disordered
#> 15 Disordered
#> 16 Disordered
#> 17 5 X 7 AA tandem repeats of K-A-S-P-Q-[AT]-[AT]
#> 18 Disordered
#> 19 Disordered
#> 20 Disordered
#> 21 Disordered
#> 22 Disordered
#> 23 Disordered
#> 24 Disordered
#> 25 Disordered
#> 26 Interaction with DAO
#> 27 Disordered
#> 28 Disordered
#> 29 Disordered
#> 30 Disordered
#> 31
#> 32
#> 33 Gly residues
#> 34 Low complexity
#> 35 Pro residues
#> 36 Polar residues
#> 37 Polar residues
#> 38 Polar residues
#> 39 Polar residues
#> 40 Pro residues
#> 41 Pro residues
#> 42 Polar residues
#> 43 Pro residues
#> 44 Polar residues
#> 45 Low complexity
#> 46 Polar residues
#> 47 Acidic residues
#> 48 Acidic residues
#> 49 Basic and acidic residues
#> 50 Low complexity
#> 51 Acidic residues
#> 52 Basic and acidic residues
#> 53 Basic and acidic residues
#> 54 Low complexity
#> 55 Low complexity
#> 56 Basic and acidic residues
#> 57 Low complexity
#> 58 Polar residues
#> 59 Low complexity
#> 60 Basic and acidic residues
#> 61 Polar residues
#> 62 Low complexity
#> 63 Polar residues
#> 64 Polar residues
#> 65 Basic and acidic residues
#> 66 Pro residues
#> 67 Basic and acidic residues
#> 68 Polar residues
#> 69 Basic and acidic residues
#> 70 Polar residues
#> 71 Low complexity
#> 72 Basic and acidic residues
#> 73 Polar residues
#> 74 Basic and acidic residues
#> 75 Basic and acidic residues
#> 76 Low complexity
#> 77 Basic and acidic residues
#> 78 Low complexity
#> 79 Basic and acidic residues
#> 80 Basic and acidic residues
#> 81 Basic residues
#> 82 Basic and acidic residues
#> 83 Low complexity
#> 84 Pro residues
#> 85 Low complexity
#> 86 Phosphoserine
#> 87 Omega-N-methylarginine
#> 88 Phosphoserine
#> 89 Phosphoserine
#> 90 Omega-N-methylarginine
#> 91 Phosphoserine
#> 92 Phosphoserine
#> 93 Phosphoserine
#> 94 Phosphoserine
#> 95 Phosphothreonine
#> 96 Phosphoserine
#> 97 Phosphoserine
#> 98 Phosphoserine
#> 99 Phosphoserine
#> 100 Phosphoserine
#> 101 Phosphoserine
#> 102 Omega-N-methylarginine
#> 103 Omega-N-methylarginine
#> 104 Asymmetric dimethylarginine; alternate
#> 105 Omega-N-methylarginine; alternate
#> 106 Omega-N-methylarginine
#> 107 Phosphoserine
#> 108 Phosphoserine
#> 109 Omega-N-methylarginine
#> 110 Omega-N-methylarginine
#> 111 Asymmetric dimethylarginine
#> 112 Asymmetric dimethylarginine
#> 113 Asymmetric dimethylarginine
#> 114 Phosphoserine
#> 115 Phosphothreonine
#> 116 Phosphothreonine
#> 117 Phosphoserine
#> 118 Phosphoserine
#> 119 Phosphoserine
#> 120 Phosphoserine
#> 121 Phosphoserine
#> 122 Phosphoserine
#> 123 Omega-N-methylarginine
#> 124 Omega-N-methylarginine
#> 125 N-myristoyl glycine
#> 126 O-linked (GlcNAc) threonine
#> 127 O-linked (GlcNAc) threonine
#> 128 O-linked (GlcNAc) serine
#> 129 O-linked (GlcNAc) threonine
#> 130 O-linked (GlcNAc) threonine
#> 131 O-linked (GlcNAc) threonine
#> 132 O-linked (GlcNAc) threonine
#> 133 O-linked (GlcNAc) threonine
#> 134 in isoform 2
#> 135 in Ref. 1; CAA76598
#> 136 in Ref. 1; CAA76598
#> 137 in Ref. 1; CAA76598
#> 138 in Ref. 1; CAA76598
#> 139 in Ref. 1; CAA76598
#> 140 in Ref. 1; CAA76598
#> 141 in Ref. 1; CAA76598
#> 142 in Ref. 1; CAA76598
#> 143 in Ref. 1; CAA76598
#> 144 in Ref. 1; CAA76598
#> evidences featureId
#> 1 ECO:0000250, UniProtKB, O88778 <NA>
#> 2 NULL PRO_0000065003
#> 3 NULL <NA>
#> 4 NULL <NA>
#> 5 NULL <NA>
#> 6 NULL <NA>
#> 7 NULL <NA>
#> 8 ECO:0000255 <NA>
#> 9 ECO:0000255 <NA>
#> 10 ECO:0000255 <NA>
#> 11 ECO:0000255 <NA>
#> 12 ECO:0000256, SAM, MobiDB-lite <NA>
#> 13 NULL <NA>
#> 14 ECO:0000256, SAM, MobiDB-lite <NA>
#> 15 ECO:0000256, SAM, MobiDB-lite <NA>
#> 16 ECO:0000256, SAM, MobiDB-lite <NA>
#> 17 NULL <NA>
#> 18 ECO:0000256, SAM, MobiDB-lite <NA>
#> 19 ECO:0000256, SAM, MobiDB-lite <NA>
#> 20 ECO:0000256, SAM, MobiDB-lite <NA>
#> 21 ECO:0000256, SAM, MobiDB-lite <NA>
#> 22 ECO:0000256, SAM, MobiDB-lite <NA>
#> 23 ECO:0000256, SAM, MobiDB-lite <NA>
#> 24 ECO:0000256, SAM, MobiDB-lite <NA>
#> 25 ECO:0000256, SAM, MobiDB-lite <NA>
#> 26 ECO:0000250, UniProtKB, O88778 <NA>
#> 27 ECO:0000256, SAM, MobiDB-lite <NA>
#> 28 ECO:0000256, SAM, MobiDB-lite <NA>
#> 29 ECO:0000256, SAM, MobiDB-lite <NA>
#> 30 ECO:0000256, SAM, MobiDB-lite <NA>
#> 31 ECO:0000255 <NA>
#> 32 ECO:0000255 <NA>
#> 33 ECO:0000256, SAM, MobiDB-lite <NA>
#> 34 ECO:0000256, SAM, MobiDB-lite <NA>
#> 35 ECO:0000256, SAM, MobiDB-lite <NA>
#> 36 ECO:0000256, SAM, MobiDB-lite <NA>
#> 37 ECO:0000256, SAM, MobiDB-lite <NA>
#> 38 ECO:0000256, SAM, MobiDB-lite <NA>
#> 39 ECO:0000256, SAM, MobiDB-lite <NA>
#> 40 ECO:0000256, SAM, MobiDB-lite <NA>
#> 41 ECO:0000256, SAM, MobiDB-lite <NA>
#> 42 ECO:0000256, SAM, MobiDB-lite <NA>
#> 43 ECO:0000256, SAM, MobiDB-lite <NA>
#> 44 ECO:0000256, SAM, MobiDB-lite <NA>
#> 45 ECO:0000256, SAM, MobiDB-lite <NA>
#> 46 ECO:0000256, SAM, MobiDB-lite <NA>
#> 47 ECO:0000256, SAM, MobiDB-lite <NA>
#> 48 ECO:0000256, SAM, MobiDB-lite <NA>
#> 49 ECO:0000256, SAM, MobiDB-lite <NA>
#> 50 ECO:0000256, SAM, MobiDB-lite <NA>
#> 51 ECO:0000256, SAM, MobiDB-lite <NA>
#> 52 ECO:0000256, SAM, MobiDB-lite <NA>
#> 53 ECO:0000256, SAM, MobiDB-lite <NA>
#> 54 ECO:0000256, SAM, MobiDB-lite <NA>
#> 55 ECO:0000256, SAM, MobiDB-lite <NA>
#> 56 ECO:0000256, SAM, MobiDB-lite <NA>
#> 57 ECO:0000256, SAM, MobiDB-lite <NA>
#> 58 ECO:0000256, SAM, MobiDB-lite <NA>
#> 59 ECO:0000256, SAM, MobiDB-lite <NA>
#> 60 ECO:0000256, SAM, MobiDB-lite <NA>
#> 61 ECO:0000256, SAM, MobiDB-lite <NA>
#> 62 ECO:0000256, SAM, MobiDB-lite <NA>
#> 63 ECO:0000256, SAM, MobiDB-lite <NA>
#> 64 ECO:0000256, SAM, MobiDB-lite <NA>
#> 65 ECO:0000256, SAM, MobiDB-lite <NA>
#> 66 ECO:0000256, SAM, MobiDB-lite <NA>
#> 67 ECO:0000256, SAM, MobiDB-lite <NA>
#> 68 ECO:0000256, SAM, MobiDB-lite <NA>
#> 69 ECO:0000256, SAM, MobiDB-lite <NA>
#> 70 ECO:0000256, SAM, MobiDB-lite <NA>
#> 71 ECO:0000256, SAM, MobiDB-lite <NA>
#> 72 ECO:0000256, SAM, MobiDB-lite <NA>
#> 73 ECO:0000256, SAM, MobiDB-lite <NA>
#> 74 ECO:0000256, SAM, MobiDB-lite <NA>
#> 75 ECO:0000256, SAM, MobiDB-lite <NA>
#> 76 ECO:0000256, SAM, MobiDB-lite <NA>
#> 77 ECO:0000256, SAM, MobiDB-lite <NA>
#> 78 ECO:0000256, SAM, MobiDB-lite <NA>
#> 79 ECO:0000256, SAM, MobiDB-lite <NA>
#> 80 ECO:0000256, SAM, MobiDB-lite <NA>
#> 81 ECO:0000256, SAM, MobiDB-lite <NA>
#> 82 ECO:0000256, SAM, MobiDB-lite <NA>
#> 83 ECO:0000256, SAM, MobiDB-lite <NA>
#> 84 ECO:0000256, SAM, MobiDB-lite <NA>
#> 85 ECO:0000256, SAM, MobiDB-lite <NA>
#> 86 ECO:0007744, PubMed, 21183079 <NA>
#> 87 ECO:0007744, PubMed, 24129315 <NA>
#> 88 ECO:0007744, PubMed, 21183079 <NA>
#> 89 ECO:0007744, PubMed, 21183079 <NA>
#> 90 ECO:0007744, PubMed, 24129315 <NA>
#> 91 ECO:0007744, PubMed, 21183079 <NA>
#> 92 ECO:0007744, PubMed, 21183079 <NA>
#> 93 ECO:0007744, PubMed, 21183079 <NA>
#> 94 ECO:0007744, PubMed, 21183079 <NA>
#> 95 ECO:0007744, PubMed, 21183079 <NA>
#> 96 ECO:0007744, ECO:0007744, PubMed, PubMed, 16452087, 21183079 <NA>
#> 97 ECO:0007744, PubMed, 21183079 <NA>
#> 98 ECO:0007744, ECO:0007744, PubMed, PubMed, 16452087, 21183079 <NA>
#> 99 ECO:0007744, PubMed, 21183079 <NA>
#> 100 ECO:0007744, PubMed, 21183079 <NA>
#> 101 ECO:0007744, PubMed, 21183079 <NA>
#> 102 ECO:0007744, PubMed, 24129315 <NA>
#> 103 ECO:0007744, PubMed, 24129315 <NA>
#> 104 ECO:0007744, PubMed, 24129315 <NA>
#> 105 ECO:0007744, PubMed, 24129315 <NA>
#> 106 ECO:0007744, PubMed, 24129315 <NA>
#> 107 ECO:0007744, PubMed, 21183079 <NA>
#> 108 ECO:0007744, PubMed, 21183079 <NA>
#> 109 ECO:0007744, PubMed, 24129315 <NA>
#> 110 ECO:0007744, PubMed, 24129315 <NA>
#> 111 ECO:0007744, PubMed, 24129315 <NA>
#> 112 ECO:0007744, PubMed, 24129315 <NA>
#> 113 ECO:0007744, PubMed, 24129315 <NA>
#> 114 ECO:0007744, ECO:0007744, PubMed, PubMed, 16452087, 21183079 <NA>
#> 115 ECO:0007744, ECO:0007744, PubMed, PubMed, 16452087, 21183079 <NA>
#> 116 ECO:0007744, ECO:0007744, PubMed, PubMed, 16452087, 21183079 <NA>
#> 117 ECO:0007744, PubMed, 21183079 <NA>
#> 118 ECO:0007744, PubMed, 21183079 <NA>
#> 119 ECO:0007744, PubMed, 21183079 <NA>
#> 120 ECO:0007744, PubMed, 21183079 <NA>
#> 121 ECO:0007744, PubMed, 21183079 <NA>
#> 122 ECO:0007744, ECO:0007744, PubMed, PubMed, 16452087, 21183079 <NA>
#> 123 ECO:0007744, PubMed, 24129315 <NA>
#> 124 ECO:0007744, PubMed, 24129315 <NA>
#> 125 ECO:0000250 <NA>
#> 126 ECO:0000250
#> 127 ECO:0000269, PubMed, 16452088
#> 128 ECO:0000269, PubMed, 16452088
#> 129 ECO:0000269, PubMed, 16452088
#> 130 ECO:0000269, PubMed, 16452088
#> 131 ECO:0000269, PubMed, 16452088
#> 132 ECO:0000269, PubMed, 16452088
#> 133 ECO:0000269, PubMed, 16452088
#> 134 ECO:0000303, PubMed, 14621295 VSP_011375
#> 135 ECO:0000305 <NA>
#> 136 ECO:0000305 <NA>
#> 137 ECO:0000305 <NA>
#> 138 ECO:0000305 <NA>
#> 139 ECO:0000305 <NA>
#> 140 ECO:0000305 <NA>
#> 141 ECO:0000305 <NA>
#> 142 ECO:0000305 <NA>
#> 143 ECO:0000305 <NA>
#> 144 ECO:0000305 <NA>
#> alternativeSequence.originalSequence
#> 1 <NA>
#> 2 <NA>
#> 3 <NA>
#> 4 <NA>
#> 5 <NA>
#> 6 <NA>
#> 7 <NA>
#> 8 <NA>
#> 9 <NA>
#> 10 <NA>
#> 11 <NA>
#> 12 <NA>
#> 13 <NA>
#> 14 <NA>
#> 15 <NA>
#> 16 <NA>
#> 17 <NA>
#> 18 <NA>
#> 19 <NA>
#> 20 <NA>
#> 21 <NA>
#> 22 <NA>
#> 23 <NA>
#> 24 <NA>
#> 25 <NA>
#> 26 <NA>
#> 27 <NA>
#> 28 <NA>
#> 29 <NA>
#> 30 <NA>
#> 31 <NA>
#> 32 <NA>
#> 33 <NA>
#> 34 <NA>
#> 35 <NA>
#> 36 <NA>
#> 37 <NA>
#> 38 <NA>
#> 39 <NA>
#> 40 <NA>
#> 41 <NA>
#> 42 <NA>
#> 43 <NA>
#> 44 <NA>
#> 45 <NA>
#> 46 <NA>
#> 47 <NA>
#> 48 <NA>
#> 49 <NA>
#> 50 <NA>
#> 51 <NA>
#> 52 <NA>
#> 53 <NA>
#> 54 <NA>
#> 55 <NA>
#> 56 <NA>
#> 57 <NA>
#> 58 <NA>
#> 59 <NA>
#> 60 <NA>
#> 61 <NA>
#> 62 <NA>
#> 63 <NA>
#> 64 <NA>
#> 65 <NA>
#> 66 <NA>
#> 67 <NA>
#> 68 <NA>
#> 69 <NA>
#> 70 <NA>
#> 71 <NA>
#> 72 <NA>
#> 73 <NA>
#> 74 <NA>
#> 75 <NA>
#> 76 <NA>
#> 77 <NA>
#> 78 <NA>
#> 79 <NA>
#> 80 <NA>
#> 81 <NA>
#> 82 <NA>
#> 83 <NA>
#> 84 <NA>
#> 85 <NA>
#> 86 <NA>
#> 87 <NA>
#> 88 <NA>
#> 89 <NA>
#> 90 <NA>
#> 91 <NA>
#> 92 <NA>
#> 93 <NA>
#> 94 <NA>
#> 95 <NA>
#> 96 <NA>
#> 97 <NA>
#> 98 <NA>
#> 99 <NA>
#> 100 <NA>
#> 101 <NA>
#> 102 <NA>
#> 103 <NA>
#> 104 <NA>
#> 105 <NA>
#> 106 <NA>
#> 107 <NA>
#> 108 <NA>
#> 109 <NA>
#> 110 <NA>
#> 111 <NA>
#> 112 <NA>
#> 113 <NA>
#> 114 <NA>
#> 115 <NA>
#> 116 <NA>
#> 117 <NA>
#> 118 <NA>
#> 119 <NA>
#> 120 <NA>
#> 121 <NA>
#> 122 <NA>
#> 123 <NA>
#> 124 <NA>
#> 125 <NA>
#> 126 <NA>
#> 127 <NA>
#> 128 <NA>
#> 129 <NA>
#> 130 <NA>
#> 131 <NA>
#> 132 <NA>
#> 133 <NA>
#> 134 <NA>
#> 135 Q
#> 136 M
#> 137 S
#> 138 M
#> 139 VTS
#> 140 T
#> 141 A
#> 142 V
#> 143 A
#> 144 S
#> alternativeSequence.alternativeSequences
#> 1 NULL
#> 2 NULL
#> 3 NULL
#> 4 NULL
#> 5 NULL
#> 6 NULL
#> 7 NULL
#> 8 NULL
#> 9 NULL
#> 10 NULL
#> 11 NULL
#> 12 NULL
#> 13 NULL
#> 14 NULL
#> 15 NULL
#> 16 NULL
#> 17 NULL
#> 18 NULL
#> 19 NULL
#> 20 NULL
#> 21 NULL
#> 22 NULL
#> 23 NULL
#> 24 NULL
#> 25 NULL
#> 26 NULL
#> 27 NULL
#> 28 NULL
#> 29 NULL
#> 30 NULL
#> 31 NULL
#> 32 NULL
#> 33 NULL
#> 34 NULL
#> 35 NULL
#> 36 NULL
#> 37 NULL
#> 38 NULL
#> 39 NULL
#> 40 NULL
#> 41 NULL
#> 42 NULL
#> 43 NULL
#> 44 NULL
#> 45 NULL
#> 46 NULL
#> 47 NULL
#> 48 NULL
#> 49 NULL
#> 50 NULL
#> 51 NULL
#> 52 NULL
#> 53 NULL
#> 54 NULL
#> 55 NULL
#> 56 NULL
#> 57 NULL
#> 58 NULL
#> 59 NULL
#> 60 NULL
#> 61 NULL
#> 62 NULL
#> 63 NULL
#> 64 NULL
#> 65 NULL
#> 66 NULL
#> 67 NULL
#> 68 NULL
#> 69 NULL
#> 70 NULL
#> 71 NULL
#> 72 NULL
#> 73 NULL
#> 74 NULL
#> 75 NULL
#> 76 NULL
#> 77 NULL
#> 78 NULL
#> 79 NULL
#> 80 NULL
#> 81 NULL
#> 82 NULL
#> 83 NULL
#> 84 NULL
#> 85 NULL
#> 86 NULL
#> 87 NULL
#> 88 NULL
#> 89 NULL
#> 90 NULL
#> 91 NULL
#> 92 NULL
#> 93 NULL
#> 94 NULL
#> 95 NULL
#> 96 NULL
#> 97 NULL
#> 98 NULL
#> 99 NULL
#> 100 NULL
#> 101 NULL
#> 102 NULL
#> 103 NULL
#> 104 NULL
#> 105 NULL
#> 106 NULL
#> 107 NULL
#> 108 NULL
#> 109 NULL
#> 110 NULL
#> 111 NULL
#> 112 NULL
#> 113 NULL
#> 114 NULL
#> 115 NULL
#> 116 NULL
#> 117 NULL
#> 118 NULL
#> 119 NULL
#> 120 NULL
#> 121 NULL
#> 122 NULL
#> 123 NULL
#> 124 NULL
#> 125 NULL
#> 126 NULL
#> 127 NULL
#> 128 NULL
#> 129 NULL
#> 130 NULL
#> 131 NULL
#> 132 NULL
#> 133 NULL
#> 134 NULL
#> 135 P
#> 136 T
#> 137 A
#> 138 V
#> 139 ATP
#> 140 M
#> 141 T
#> 142 A
#> 143 V
#> 144 G
#>
#> $keywords
#> id category name
#> 1 KW-0025 Coding sequence diversity Alternative splicing
#> 2 KW-0966 Cellular component Cell projection
#> 3 KW-0175 Domain Coiled coil
#> 4 KW-0963 Cellular component Cytoplasm
#> 5 KW-0968 Cellular component Cytoplasmic vesicle
#> 6 KW-0206 Cellular component Cytoskeleton
#> 7 KW-0325 PTM Glycoprotein
#> 8 KW-0449 PTM Lipoprotein
#> 9 KW-0472 Cellular component Membrane
#> 10 KW-0479 Ligand Metal-binding
#> 11 KW-0488 PTM Methylation
#> 12 KW-0519 PTM Myristate
#> 13 KW-0597 PTM Phosphoprotein
#> 14 KW-1185 Technical term Reference proteome
#> 15 KW-0677 Domain Repeat
#> 16 KW-0770 Cellular component Synapse
#> 17 KW-0862 Ligand Zinc
#> 18 KW-0863 Domain Zinc-finger
#>
#> $references
#> referenceNumber citation.id citation.citationType
#> 1 1 9679147 journal article
#> 2 2 19468303 journal article
#> 3 3 14621295 journal article
#> 4 4 12628168 journal article
#> 5 5 12628169 journal article
#> 6 6 16452087 journal article
#> 7 7 16452088 journal article
#> 8 8 17869247 journal article
#> 9 9 17114649 journal article
#> 10 10 19812333 journal article
#> 11 11 21183079 journal article
#> 12 12 24129315 journal article
#> 13 13 28231469 journal article
#> citation.authors
#> 1 tom Dieck S., Sanmarti-Vila L., Langnaese K., Richter K., Kindler S., Soyke A., Wex H., Smalla K.-H., Kaempf U., Fraenzer J.-T., Stumm M., Garner C.C., Gundelfinger E.D.
#> 2 Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S., Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
#> 3 Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Nagase T., Ohara O., Koga H.
#> 4 Dick O., tom Dieck S., Altrock W.D., Ammermueller J., Weiler R., Garner C.C., Gundelfinger E.D., Brandstaetter J.H.
#> 5 Altrock W.D., tom Dieck S., Sokolov M., Meyer A.C., Sigler A., Brakebusch C., Faessler R., Richter K., Boeckers T.M., Potschka H., Brandt C., Loescher W., Grimberg D., Dresbach T., Hempelmann A., Hassan H., Balschun D., Frey J.U., Brandstaetter J.H., Garner C.C., Rosenmund C., Gundelfinger E.D.
#> 6 Trinidad J.C., Specht C.G., Thalhammer A., Schoepfer R., Burlingame A.L.
#> 7 Vosseller K., Trinidad J.C., Chalkley R.J., Specht C.G., Thalhammer A., Lynn A.J., Snedecor J.O., Guan S., Medzihradszky K.F., Maltby D.A., Schoepfer R., Burlingame A.L.
#> 8 Kremer T., Kempf C., Wittenmayer N., Nawrotzki R., Kuner T., Kirsch J., Dresbach T.
#> 9 Munton R.P., Tweedie-Cullen R., Livingstone-Zatchej M., Weinandy F., Waidelich M., Longo D., Gehrig P., Potthast F., Rutishauser D., Gerrits B., Panse C., Schlapbach R., Mansuy I.M.
#> 10 Wang X., Hu B., Zieba A., Neumann N.G., Kasper-Sonnenberg M., Honsbein A., Hultqvist G., Conze T., Witt W., Limbach C., Geitmann M., Danielson H., Kolarow R., Niemann G., Lessmann V., Kilimann M.W.
#> 11 Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R., Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.
#> 12 Guo A., Gu H., Zhou J., Mulhern D., Wang Y., Lee K.A., Yang V., Aguiar M., Kornhauser J., Jia X., Ren J., Beausoleil S.A., Silva J.C., Vemulapalli V., Bedford M.T., Comb M.J.
#> 13 Okerlund N.D., Schneider K., Leal-Ortiz S., Montenegro-Venegas C., Kim S.A., Garner L.C., Waites C.L., Gundelfinger E.D., Reimer R.J., Garner C.C.
#> citation.citationCrossReferences
#> 1 PubMed, DOI, 9679147, 10.1083/jcb.142.2.499
#> 2 PubMed, DOI, 19468303, 10.1371/journal.pbio.1000112
#> 3 PubMed, DOI, 14621295, 10.1093/dnares/10.4.167
#> 4 PubMed, DOI, 12628168, 10.1016/s0896-6273(03)00086-2
#> 5 PubMed, DOI, 12628169, 10.1016/s0896-6273(03)00088-6
#> 6 PubMed, DOI, 16452087, 10.1074/mcp.t500041-mcp200
#> 7 PubMed, DOI, 16452088, 10.1074/mcp.t500040-mcp200
#> 8 PubMed, DOI, 17869247, 10.1016/j.febslet.2007.08.070
#> 9 PubMed, DOI, 17114649, 10.1074/mcp.m600046-mcp200
#> 10 PubMed, DOI, 19812333, 10.1523/jneurosci.1255-09.2009
#> 11 PubMed, DOI, 21183079, 10.1016/j.cell.2010.12.001
#> 12 PubMed, DOI, 24129315, 10.1074/mcp.o113.027870
#> 13 PubMed, DOI, 28231469, 10.1016/j.neuron.2017.01.026
#> citation.title
#> 1 Bassoon, a novel zinc-finger CAG/Glutamine-repeat protein selectively localized at the active zone of presynaptic nerve terminals.
#> 2 Lineage-specific biology revealed by a finished genome assembly of the mouse.
#> 3 Prediction of the coding sequences of mouse homologues of KIAA gene: III. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.
#> 4 The presynaptic active zone protein bassoon is essential for photoreceptor ribbon synapse formation in the retina.
#> 5 Functional inactivation of a fraction of excitatory synapses in mice deficient for the active zone protein bassoon.
#> 6 Comprehensive identification of phosphorylation sites in postsynaptic density preparations.
#> 7 O-linked N-acetylglucosamine proteomics of postsynaptic density preparations using lectin weak affinity chromatography and mass spectrometry.
#> 8 Mover is a novel vertebrate-specific presynaptic protein with differential distribution at subsets of CNS synapses.
#> 9 Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations.
#> 10 A protein interaction node at the neurotransmitter release site: domains of Aczonin/Piccolo, Bassoon, CAST, and rim converge on the N-terminal domain of Munc13-1.
#> 11 A tissue-specific atlas of mouse protein phosphorylation and expression.
#> 12 Immunoaffinity enrichment and mass spectrometry analysis of protein methylation.
#> 13 Bassoon Controls Presynaptic Autophagy through Atg5.
#> citation.publicationDate citation.journal citation.firstPage
#> 1 1998 J. Cell Biol. 499
#> 2 2009 PLoS Biol. E1000112
#> 3 2003 DNA Res. 167
#> 4 2003 Neuron 775
#> 5 2003 Neuron 787
#> 6 2006 Mol. Cell. Proteomics 914
#> 7 2006 Mol. Cell. Proteomics 923
#> 8 2007 FEBS Lett. 4727
#> 9 2007 Mol. Cell. Proteomics 283
#> 10 2009 J. Neurosci. 12584
#> 11 2010 Cell 1174
#> 12 2014 Mol. Cell. Proteomics 372
#> 13 2017 Neuron 897
#> citation.lastPage citation.volume
#> 1 509 142
#> 2 E1000112 7
#> 3 180 10
#> 4 786 37
#> 5 800 37
#> 6 922 5
#> 7 934 5
#> 8 4733 581
#> 9 293 6
#> 10 12596 29
#> 11 1189 143
#> 12 387 13
#> 13 913 93
#> referencePositions
#> 1 NUCLEOTIDE SEQUENCE [GENOMIC DNA] (ISOFORM 1)
#> 2 NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]
#> 3 NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 2714-3942 (ISOFORM 2)
#> 4 FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY, DISRUPTION PHENOTYPE
#> 5 FUNCTION, SUBCELLULAR LOCATION, TISSUE SPECIFICITY
#> 6 PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-1108; SER-1236; SER-2578; THR-2595; THR-2622 AND SER-3382, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
#> 7 GLYCOSYLATION [LARGE SCALE ANALYSIS] AT THR-1395; SER-1707; THR-1934; THR-2318; THR-2524; THR-2700 AND THR-2945
#> 8 INTERACTION WITH TPRG1L
#> 9 IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
#> 10 FUNCTION, INTERACTION WITH PCLO, ERC2/CAST1, RIMS1 AND UNC13A, TISSUE SPECIFICITY
#> 11 PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-142; SER-241; SER-245; SER-980; SER-1050; SER-1051; SER-1100; THR-1102; SER-1108; SER-1114; SER-1236; SER-1482; SER-1491; SER-1493; SER-1990; SER-2046; SER-2578; THR-2595; THR-2622; SER-2811; SER-2860; SER-2866; SER-3022; SER-3301 AND SER-3382, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
#> 12 METHYLATION [LARGE SCALE ANALYSIS] AT ARG-145; ARG-881; ARG-1792; ARG-1796; ARG-1806; ARG-1818; ARG-2051; ARG-2081; ARG-2255; ARG-2265; ARG-2270; ARG-3502 AND ARG-3823, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]
#> 13 FUNCTION, INTERACTION WITH ATG5, DISRUPTION PHENOTYPE
#> referenceComments
#> 1 129/SvJ, STRAIN
#> 2 C57BL/6J, STRAIN
#> 3 Brain, TISSUE
#> 4 NULL
#> 5 NULL
#> 6 Brain, TISSUE
#> 7 Brain, TISSUE
#> 8 Brain, TISSUE
#> 9 Brain cortex, TISSUE
#> 10 NULL
#> 11 Brain, TISSUE
#> 12 Brain, TISSUE
#> 13 NULL
#>
#> $uniProtKBCrossReferences
#> database id
#> 1 EMBL Y17034
#> 2 EMBL Y17035
#> 3 EMBL Y17036
#> 4 EMBL Y17037
#> 5 EMBL Y17038
#> 6 EMBL AC137678
#> 7 EMBL AC168217
#> 8 EMBL AK129141
#> 9 CCDS CCDS23517.1
#> 10 PIR T42730
#> 11 RefSeq NP_031593.2
#> 12 RefSeq XP_006511697.1
#> 13 SMR O88737
#> 14 BioGRID 198393
#> 15 FunCoup O88737
#> 16 IntAct O88737
#> 17 MINT O88737
#> 18 STRING 10090.ENSMUSP00000035208
#> 19 GlyCosmos O88737
#> 20 GlyGen O88737
#> 21 iPTMnet O88737
#> 22 MetOSite O88737
#> 23 PhosphoSitePlus O88737
#> 24 SwissPalm O88737
#> 25 PaxDb 10090-ENSMUSP00000035208
#> 26 PeptideAtlas O88737
#> 27 ProteomicsDB 273847
#> 28 ProteomicsDB 273848
#> 29 ABCD O88737
#> 30 Antibodypedia 13612
#> 31 DNASU 12217
#> 32 Ensembl ENSMUST00000035208.14
#> 33 GeneID 12217
#> 34 KEGG mmu:12217
#> 35 UCSC uc009rov.1
#> 36 AGR MGI:1277955
#> 37 CTD 8927
#> 38 MGI MGI:1277955
#> 39 VEuPathDB HostDB:ENSMUSG00000032589
#> 40 eggNOG ENOG502QSYS
#> 41 GeneTree ENSGT00620000087961
#> 42 HOGENOM CLU_000104_1_0_1
#> 43 InParanoid O88737
#> 44 OMA GMYRPYV
#> 45 OrthoDB 10059918at2759
#> 46 PhylomeDB O88737
#> 47 BioGRID-ORCS 12217
#> 48 CD-CODE CE726F99
#> 49 PRO PR:O88737
#> 50 Proteomes UP000000589
#> 51 RNAct O88737
#> 52 Bgee ENSMUSG00000032589
#> 53 ExpressionAtlas O88737
#> 54 GO GO:0030424
#> 55 GO GO:1904115
#> 56 GO GO:0005938
#> 57 GO GO:0009986
#> 58 GO GO:0098683
#> 59 GO GO:0048788
#> 60 GO GO:0005829
#> 61 GO GO:0030425
#> 62 GO GO:0060076
#> 63 GO GO:0019898
#> 64 GO GO:0098982
#> 65 GO GO:0098978
#> 66 GO GO:0005798
#> 67 GO GO:0098686
#> 68 GO GO:0060077
#> 69 GO GO:0044306
#> 70 GO GO:0043025
#> 71 GO GO:1990257
#> 72 GO GO:0014069
#> 73 GO GO:0098793
#> 74 GO GO:0048786
#> 75 GO GO:0098831
#> 76 GO GO:0097470
#> 77 GO GO:0098685
#> 78 GO GO:0045202
#> 79 GO GO:0097060
#> 80 GO GO:0008021
#> 81 GO GO:0030672
#> 82 GO GO:0005802
#> 83 GO GO:0045503
#> 84 GO GO:0004857
#> 85 GO GO:0098882
#> 86 GO GO:0001222
#> 87 GO GO:0008270
#> 88 GO GO:0008088
#> 89 GO GO:0050804
#> 90 GO GO:1904071
#> 91 GO GO:0035418
#> 92 GO GO:0098693
#> 93 GO GO:0008090
#> 94 GO GO:0050808
#> 95 GO GO:0097091
#> 96 CDD cd15773
#> 97 CDD cd15772
#> 98 FunFam 3.30.40.10:FF:000326
#> 99 Gene3D 3.30.40.10
#> 100 InterPro IPR030627
#> 101 InterPro IPR052098
#> 102 InterPro IPR011011
#> 103 InterPro IPR008899
#> 104 InterPro IPR013083
#> 105 PANTHER PTHR14113
#> 106 PANTHER PTHR14113:SF1
#> 107 Pfam PF05715
#> 108 SUPFAM SSF57903
#> properties
#> 1 ProteinId, Status, MoleculeType, CAA76598.1, -, Genomic_DNA
#> 2 ProteinId, Status, MoleculeType, CAA76598.1, JOINED, Genomic_DNA
#> 3 ProteinId, Status, MoleculeType, CAA76598.1, JOINED, Genomic_DNA
#> 4 ProteinId, Status, MoleculeType, CAA76598.1, JOINED, Genomic_DNA
#> 5 ProteinId, Status, MoleculeType, CAA76598.1, JOINED, Genomic_DNA
#> 6 ProteinId, Status, MoleculeType, -, NOT_ANNOTATED_CDS, Genomic_DNA
#> 7 ProteinId, Status, MoleculeType, -, NOT_ANNOTATED_CDS, Genomic_DNA
#> 8 ProteinId, Status, MoleculeType, BAC97951.1, -, mRNA
#> 9 Description, -
#> 10 EntryName, T42730
#> 11 NucleotideSequenceId, NM_007567.2
#> 12 NucleotideSequenceId, XM_006511634.4
#> 13 Description, -
#> 14 Interactions, 16
#> 15 Number of interactors, 527
#> 16 Interactions, 8
#> 17 Description, -
#> 18 Description, -
#> 19 glycosylation, 8 sites, No reported glycans
#> 20 glycosylation, 255 sites, 1 O-linked glycan (246 sites)
#> 21 Description, -
#> 22 Description, -
#> 23 Description, -
#> 24 Description, -
#> 25 Description, -
#> 26 Description, -
#> 27 Description, -
#> 28 Description, -
#> 29 antibodies, 1 sequenced antibody
#> 30 antibodies, 128 antibodies from 22 providers
#> 31 Description, -
#> 32 ProteinId, GeneId, ENSMUSP00000035208.7, ENSMUSG00000032589.15
#> 33 Description, -
#> 34 Description, -
#> 35 OrganismName, mouse
#> 36 Description, -
#> 37 Description, -
#> 38 GeneName, Bsn
#> 39 Description, -
#> 40 ToxonomicScope, Eukaryota
#> 41 Description, -
#> 42 Description, -
#> 43 Description, -
#> 44 Fingerprint, -
#> 45 Description, -
#> 46 Description, -
#> 47 hits, 3 hits in 76 CRISPR screens
#> 48 EntryName, Postsynaptic density
#> 49 Description, -
#> 50 Component, Chromosome 9
#> 51 moleculeType, protein
#> 52 ExpressionPatterns, Expressed in subiculum and 108 other cell types or tissues
#> 53 ExpressionPatterns, baseline and differential
#> 54 GoTerm, GoEvidenceType, C:axon, IDA:MGI
#> 55 GoTerm, GoEvidenceType, C:axon cytoplasm, ISO:GO_Central
#> 56 GoTerm, GoEvidenceType, C:cell cortex, ISO:GO_Central
#> 57 GoTerm, GoEvidenceType, C:cell surface, IDA:CACAO
#> 58 GoTerm, GoEvidenceType, C:cochlear hair cell ribbon synapse, IDA:SynGO
#> 59 GoTerm, GoEvidenceType, C:cytoskeleton of presynaptic active zone, ISO:GO_Central
#> 60 GoTerm, GoEvidenceType, C:cytosol, TAS:Reactome
#> 61 GoTerm, GoEvidenceType, C:dendrite, IDA:BHF-UCL
#> 62 GoTerm, GoEvidenceType, C:excitatory synapse, ISS:ParkinsonsUK-UCL
#> 63 GoTerm, GoEvidenceType, C:extrinsic component of membrane, ISO:MGI
#> 64 GoTerm, GoEvidenceType, C:GABA-ergic synapse, IDA:SynGO
#> 65 GoTerm, GoEvidenceType, C:glutamatergic synapse, IDA:SynGO
#> 66 GoTerm, GoEvidenceType, C:Golgi-associated vesicle, ISO:GO_Central
#> 67 GoTerm, GoEvidenceType, C:hippocampal mossy fiber to CA3 synapse, ISO:GO_Central
#> 68 GoTerm, GoEvidenceType, C:inhibitory synapse, ISO:GO_Central
#> 69 GoTerm, GoEvidenceType, C:neuron projection terminus, IDA:MGI
#> 70 GoTerm, GoEvidenceType, C:neuronal cell body, ISO:GO_Central
#> 71 GoTerm, GoEvidenceType, C:piccolo-bassoon transport vesicle, ISO:GO_Central
#> 72 GoTerm, GoEvidenceType, C:postsynaptic density, IDA:MGI
#> 73 GoTerm, GoEvidenceType, C:presynapse, IDA:MGI
#> 74 GoTerm, GoEvidenceType, C:presynaptic active zone, IDA:MGI
#> 75 GoTerm, GoEvidenceType, C:presynaptic active zone cytoplasmic component, ISO:GO_Central
#> 76 GoTerm, GoEvidenceType, C:ribbon synapse, ISO:GO_Central
#> 77 GoTerm, GoEvidenceType, C:Schaffer collateral - CA1 synapse, IDA:SynGO
#> 78 GoTerm, GoEvidenceType, C:synapse, IDA:MGI
#> 79 GoTerm, GoEvidenceType, C:synaptic membrane, ISO:GO_Central
#> 80 GoTerm, GoEvidenceType, C:synaptic vesicle, ISS:UniProtKB
#> 81 GoTerm, GoEvidenceType, C:synaptic vesicle membrane, IEA:UniProtKB-SubCell
#> 82 GoTerm, GoEvidenceType, C:trans-Golgi network, ISO:GO_Central
#> 83 GoTerm, GoEvidenceType, F:dynein light chain binding, ISO:GO_Central
#> 84 GoTerm, GoEvidenceType, F:enzyme inhibitor activity, ISS:UniProtKB
#> 85 GoTerm, GoEvidenceType, F:structural constituent of presynaptic active zone, IDA:SynGO
#> 86 GoTerm, GoEvidenceType, F:transcription corepressor binding, ISO:GO_Central
#> 87 GoTerm, GoEvidenceType, F:zinc ion binding, IEA:UniProtKB-KW
#> 88 GoTerm, GoEvidenceType, P:axo-dendritic transport, ISO:GO_Central
#> 89 GoTerm, GoEvidenceType, P:modulation of chemical synaptic transmission, ISS:UniProtKB
#> 90 GoTerm, GoEvidenceType, P:presynaptic active zone assembly, ISO:GO_Central
#> 91 GoTerm, GoEvidenceType, P:protein localization to synapse, IGI:ParkinsonsUK-UCL
#> 92 GoTerm, GoEvidenceType, P:regulation of synaptic vesicle cycle, IDA:SynGO
#> 93 GoTerm, GoEvidenceType, P:retrograde axonal transport, ISO:GO_Central
#> 94 GoTerm, GoEvidenceType, P:synapse organization, ISO:GO_Central
#> 95 GoTerm, GoEvidenceType, P:synaptic vesicle clustering, IDA:SynGO
#> 96 EntryName, MatchStatus, FYVE1_BSN, 1
#> 97 EntryName, MatchStatus, FYVE2_BSN_PCLO, 1
#> 98 EntryName, MatchStatus, Bassoon presynaptic cytomatrix protein, 1
#> 99 EntryName, MatchStatus, Zinc/RING finger domain, C3HC4 (zinc finger), 2
#> 100 EntryName, Bsn_FYVE_dom
#> 101 EntryName, Presynaptic_Scaffold_Bsn/Pclo
#> 102 EntryName, Znf_FYVE_PHD
#> 103 EntryName, Znf_piccolo
#> 104 EntryName, Znf_RING/FYVE/PHD
#> 105 EntryName, MatchStatus, PICCOLO/BASSOON, 1
#> 106 EntryName, MatchStatus, PROTEIN BASSOON, 1
#> 107 EntryName, MatchStatus, zf-piccolo, 2
#> 108 EntryName, MatchStatus, FYVE/PHD zinc finger, 2
#> isoformId
#> 1 <NA>
#> 2 <NA>
#> 3 <NA>
#> 4 <NA>
#> 5 <NA>
#> 6 <NA>
#> 7 <NA>
#> 8 <NA>
#> 9 O88737-1
#> 10 <NA>
#> 11 O88737-1
#> 12 O88737-1
#> 13 <NA>
#> 14 <NA>
#> 15 <NA>
#> 16 <NA>
#> 17 <NA>
#> 18 <NA>
#> 19 <NA>
#> 20 <NA>
#> 21 <NA>
#> 22 <NA>
#> 23 <NA>
#> 24 <NA>
#> 25 <NA>
#> 26 <NA>
#> 27 O88737-1
#> 28 O88737-2
#> 29 <NA>
#> 30 <NA>
#> 31 <NA>
#> 32 O88737-1
#> 33 <NA>
#> 34 <NA>
#> 35 O88737-1
#> 36 <NA>
#> 37 <NA>
#> 38 <NA>
#> 39 <NA>
#> 40 <NA>
#> 41 <NA>
#> 42 <NA>
#> 43 <NA>
#> 44 <NA>
#> 45 <NA>
#> 46 <NA>
#> 47 <NA>
#> 48 <NA>
#> 49 <NA>
#> 50 <NA>
#> 51 <NA>
#> 52 <NA>
#> 53 <NA>
#> 54 <NA>
#> 55 <NA>
#> 56 <NA>
#> 57 <NA>
#> 58 <NA>
#> 59 <NA>
#> 60 <NA>
#> 61 <NA>
#> 62 <NA>
#> 63 <NA>
#> 64 <NA>
#> 65 <NA>
#> 66 <NA>
#> 67 <NA>
#> 68 <NA>
#> 69 <NA>
#> 70 <NA>
#> 71 <NA>
#> 72 <NA>
#> 73 <NA>
#> 74 <NA>
#> 75 <NA>
#> 76 <NA>
#> 77 <NA>
#> 78 <NA>
#> 79 <NA>
#> 80 <NA>
#> 81 <NA>
#> 82 <NA>
#> 83 <NA>
#> 84 <NA>
#> 85 <NA>
#> 86 <NA>
#> 87 <NA>
#> 88 <NA>
#> 89 <NA>
#> 90 <NA>
#> 91 <NA>
#> 92 <NA>
#> 93 <NA>
#> 94 <NA>
#> 95 <NA>
#> 96 <NA>
#> 97 <NA>
#> 98 <NA>
#> 99 <NA>
#> 100 <NA>
#> 101 <NA>
#> 102 <NA>
#> 103 <NA>
#> 104 <NA>
#> 105 <NA>
#> 106 <NA>
#> 107 <NA>
#> 108 <NA>
#> evidences
#> 1 NULL
#> 2 NULL
#> 3 NULL
#> 4 NULL
#> 5 NULL
#> 6 NULL
#> 7 NULL
#> 8 NULL
#> 9 NULL
#> 10 NULL
#> 11 NULL
#> 12 NULL
#> 13 NULL
#> 14 NULL
#> 15 NULL
#> 16 NULL
#> 17 NULL
#> 18 NULL
#> 19 NULL
#> 20 NULL
#> 21 NULL
#> 22 NULL
#> 23 NULL
#> 24 NULL
#> 25 NULL
#> 26 NULL
#> 27 NULL
#> 28 NULL
#> 29 NULL
#> 30 NULL
#> 31 NULL
#> 32 NULL
#> 33 NULL
#> 34 NULL
#> 35 NULL
#> 36 NULL
#> 37 NULL
#> 38 NULL
#> 39 NULL
#> 40 NULL
#> 41 NULL
#> 42 NULL
#> 43 NULL
#> 44 NULL
#> 45 NULL
#> 46 NULL
#> 47 NULL
#> 48 NULL
#> 49 NULL
#> 50 NULL
#> 51 NULL
#> 52 NULL
#> 53 NULL
#> 54 ECO:0000314, PubMed, 23791195
#> 55 NULL
#> 56 NULL
#> 57 ECO:0000314, PubMed, 21940441
#> 58 ECO:0000314, PubMed, 21092861
#> 59 NULL
#> 60 NULL
#> 61 ECO:0000314, PubMed, 21940441
#> 62 NULL
#> 63 ECO:0000266, PubMed, 9679147
#> 64 ECO:0000314, PubMed, 26793095
#> 65 ECO:0000314, ECO:0000314, PubMed, PubMed, 26793095, 21092860
#> 66 NULL
#> 67 NULL
#> 68 NULL
#> 69 ECO:0000314, PubMed, 12115694
#> 70 NULL
#> 71 NULL
#> 72 ECO:0000314, PubMed, 17114649
#> 73 ECO:0000314, ECO:0000314, PubMed, PubMed, 24554721, 31787876
#> 74 ECO:0000314, ECO:0000314, ECO:0000314, ECO:0000314, PubMed, PubMed, PubMed, PubMed, 15935055, 21356198, 23791195, 25709106
#> 75 NULL
#> 76 NULL
#> 77 ECO:0000314, PubMed, 26793095
#> 78 ECO:0000314, ECO:0000314, ECO:0000314, ECO:0000314, PubMed, PubMed, PubMed, PubMed, 10900017, 12115694, 14622577, 19966281
#> 79 NULL
#> 80 NULL
#> 81 NULL
#> 82 NULL
#> 83 NULL
#> 84 NULL
#> 85 ECO:0000314, ECO:0000314, PubMed, PubMed, 26793095, 21092861
#> 86 NULL
#> 87 NULL
#> 88 NULL
#> 89 NULL
#> 90 NULL
#> 91 ECO:0000316, PubMed, 25652077
#> 92 ECO:0000314, PubMed, 21092860
#> 93 NULL
#> 94 NULL
#> 95 ECO:0000314, PubMed, 20332206
#> 96 NULL
#> 97 NULL
#> 98 NULL
#> 99 NULL
#> 100 NULL
#> 101 NULL
#> 102 NULL
#> 103 NULL
#> 104 NULL
#> 105 NULL
#> 106 NULL
#> 107 NULL
#> 108 NULL
#>
#> $sequence
#> $sequence$value
#> [1] "MGNEASLEGGAGEGPLPPGGSGLGPGPGAGKPPSALAGGGQLPVAGAARAAGPPTPGLGPVPGPGPGPGPGSVPRRLDPKEPLGSQRTTSPTPKQASATAPGRESPRETRAQGPSGQEAESPRRTLQVDSRTQRSGRSPSVSPDRGSTPTSPYSVPQIAPLPSSTLCPICKTSDLTSTPSQPNFNTCTQCHNKVCNQCGFNPNPHLTQVKEWLCLNCQMQRALGMDMTTAPRSKSQQQLHSPALSPAHSPAKQPLGKPEQERSPRGPGATQSGPRQAEAARATSVPGPTQATAPPEVGRVSPQPPLSTKPSTAEPRPPAGEAQGKSATTVPSGLGAGEQTQEGLTGKLFGLGASLLTQASTLMSVQPEADTQGQPSPSKGQPKIVFSDASKEAGPRPPGSGPGPGPTPGAKTEPGARMGPGSGPGALAKTGGTASPKHGRAEHQAASKAAAKPKTMPKERASACPLCQAELNMGSRGPANYNTCTACKLQVCNLCGFNPTPHLVEKTEWLCLNCQTKRLLEGSLGEPAPLPLPTPQQPPAGVPHRAAGAAPLKQKGPQGLGQPSGSLPAKASPQATKASPQATKASPQATKASPQTTKASPQAKPLRATEPSKTSSSAQEKKTVTSAKAEPVPKPPPETTVPPGTPKAKSGVKRTDPATPVVKPVPEAPKGGEAEEPVPKPYSQDLSRSPQSLSDTGYSSDGVSSSQSEITGVVQQEVEQLDSAGVTGPRPPSPSELHKVGSSLRPSLEAQAVAPSAEWSKPPRSSSSAVEDQKRRPHSLSITPEAFDSDEELGDILEEDDSLAWGRQREQQDTAESSDDFGSQLRHDYVEDSSEGGLSPLPPQPPARADMTDEEFMRRQILEMSAEEDNLEEDDTAVSGRGLAKHSAQKASARPRPESSQEPKRRLPHNATTGYEELLSEAGPAEPTDSSGALQGGLRRFKTIELNSTGSYGHELDLGQGPDPNLDREPELEMESLTGSPEDRSRGEHSSTLPASTPSYTSGTSPTSLSSLEEDSDSSPSRRQRLEEAKQQRKARHRSHGPLLPTIEDSSEEEELREEEELLREQEKMREVEQQRIRSTARKTRRDKEELRAQRRRERSKTPPSNLSPIEDASPTEELRQAAEMEELHRSSCSEYSPSPSLDSEAETLDGGPTRLYKSGSEYNLPAFMSLYSPTETPSGSSTTPSSGRPLKSAEEAYEDMMRKAEMLQRQQGQVAGARGPHGGPSQPTGPRSQGSFEYQDTQDHDYGGRASQPVAESTPAGLGAAVYEEILQTSQSIARMRQASSRDLGFTEDKKKEKQFLNAESAYMDPMKQNGGPLTPGTSPTQLAAPVSFSTSTSSDSSGGRVIPDVRVTQHFAKEPQDPLKLHSSPVSSTLTSKEVGMTFSQGPGSPATTASPTRGYMTPTSPAGSERSPSTSSTIHSYGQPPTTANYGSQTEELPHAPSGPPGSGRAPREKPLSGGDSEVGAPQPSRGYSYFTGSSPPLSPSTPSESPTFSPGKLGPRATAEFSTQTPSLTLSSDIPRSPGPPSPMVAQGTQTPHRPSTPRLVWQQSSQEAPIMVITLASDASSQTRMVHASASTSPLCSPTDSQPTSHSYSQTTPPSASQMPSEPAGPPGFPRAPSAGTDGPLALYGWGALPAENISLCRISSVPGTSRVEPGPRPPGTAVVDLRTAVKPTPIILTDQGMDLTSLAVEARKYGLALDPVSGRQSTAVQPLVINLNAQEQTHTFLATATTVSITMASSVLMAQQKQPVVYGDPFQSRLDFGQGSGSPVCLAQVKQVEQAVQTAPYRGGPRGRPREAKFARYNLPNQVTPLARRDILITQMGTAQGVGLKPGPVPEPGAEPHRATPAELRSHAPPGTRKPHTVVVQMGEGTAGTVTTLLPEEPAGALDLTGMRPESQLACCDMVYKFPFGSSCTGTFHPAPSAPDKSVTDTALPGQSSGPFYSPRDPEPPEPLTFRTQGVVGPGPHEEQRPYPQGLPGRLYSSMSDTNLAEAGLNYHAQRLGQLFQGPGRDSAVDLSSLKHSYSLGFADGRYLGQGLQYGSFTDLRHPTDLLSHPLPLRRYSSVSNIYSDHRYGPRGDAVGFQEASLAQYSATTAREISRMCAALNSMDQYGGRHGSGSGGPDLVQYQPQHGPGLSAPQGLAPLRSGLLGNPTYPEGQPSPGNLAQYGPAASQATAVRQLLPSTATVRAADGMIYSTINTPIAATLPITTQPASVLRPMVRGGMYRPYVSGGVTAVPLTSLTRVPMIAPRVPLGPAGLYRYPAPRFPIASSVPPAEGPVYLGKPAAAKASGAGGPPRPELPAGVAREEPFSTTAPAVIKEAPVAPAPGPAPAPPPGQKPAGEAVAGSGSGVLSRPASEKEEASQEDRQRKQQEQLLQLERERVELEKLRQLRLQEELERERVELQRHREEEQLLVQRELQELQTIKQHVLQQQQEERQAQFALQREQLAQQRLQLEQIQQLQQQLQLQLEEQKQRQKAPFPATCEAPSRGPPPAATELAQNGQYWPPLTHAAFIAVAGTEGPGQPREPVLHRGLPSSASDMSLQTEEQWEAGRSGIKKRHSMPRLRDACEPESGPDPSTVRRIADSSVQTDDEEGEGRYLVTRRRRTRRSADCSVQTDDEDNADWEQPVRRRRSRLSRHSDSGSDSKHDATASSSTTAAATARAMSSVGIQTISDCSVQTEPEQLPRVSPAIHITAATDPKVEIVRYISAPEKTGRGESLACQTEPDGQAQGVAGPQLIGPTAISPYLPGIQIVTPGALGRFEKKKPDPLEIGYQAHLPPESLSQLVSRQPPKSPQVLYSPVSPLSPHRLLDTSFASSERLNKAHVSPQKQFIADSTLRQQTLPRPMKTLQRSLSDPKPLSPTAEESAKERFSLYQHQGGLGSQVSALPPNGLVRKVKRTLPSPPPEEAHLPLAGQVPSQLYAASLLQRGLAGPTTVPATKASLLRELDRDLRLVEHESTKLRKKQAELDEEEKEIDAKLKYLELGITQRKESLAKDRGGRDYPPLRGLGEHRDYLSDSELNQLRLQGCTTPAGQYVDYPASAAVPATPSGPTAFQQPRFPPAAPQYTAGSSGPTQNGFPAHQAPTYTGPSTYPAPTYPPGTGYPAEPGLPSQPAFHPTGHYAAPTPMPTTQSAPFPVQADSRAAHQKPRQTSLADLEQKVPTNYEVIGSPAVTMSSAPPETGYSGPAVSGSYEQGKAPEHPRGSDRSSVSQSPAPTYPSDSHYTSLEQNVPRNYVMIDDISELTKDSTPTASESQRLEPLGPGGVSGRPGKDPGEPAVLEGPTLPCCYGRGEEESEEDSYDPRGKSGHHRSMESNGRPSTHYYGDSDYRHGARADKYGPGPMGPKHPSKSLAPAAISSKRSKHRKQGMEQKISKFSPIEEAKDVESDLASYPPPTVSSSLTSRGRKFQDEITYGLKKNVYEQQRYYGVSSRDAAEEDERMYGSSSRSRMASAYSGEKLSSHDYSSRGKGYERERDTAERLQKAGSKPSSLSMAHGRARPPMRSQASEEESPVSPLGRPRPAGGALPPGDTCPQFCSSHSMPDVQEHVKDGPRAHAYKREEGYMLDDSHCVVSDSEAYHLGQEETDWFDKPRDARSDRFRHHGGHTVSSSQKRGPARHSYHDYDEPPEEGLWPHDEGGPGRHTSAKEHRHHSDHGRHSGRHAGEEPGRRAAKPHARDMGRHEARPHPQASPAPAMQKKGQPGYPSSADYSQSSRAPSAYHHASESKKGSRQAHTGPSALQPKADTQAQPQMQGRQAAPGPQQSQPPSSRQTPSGTASRQPQTQQQQQQQQQQQGLGQQAPQQAPSQARLQPQSQPTTRGTAPAASQPAGKPQPGPTTAPGPQPAGPPRAEQASSSKPPAAKAPQQGRAPQAQTTPGPGPAGAKPGARPGGTPGAPASQPGAEGESVFSKILPGGAAEQAGKLTEAVSAFGKKFSSFW"
#>
#> $sequence$length
#> [1] 3942
#>
#> $sequence$molWeight
#> [1] 418843
#>
#> $sequence$crc64
#> [1] "E8BEE60189570857"
#>
#> $sequence$md5
#> [1] "E5771222353888677BC5F83B65EF1C56"
#>
#>
#> $extraAttributes
#> $extraAttributes$countByCommentType
#> $extraAttributes$countByCommentType$FUNCTION
#> [1] 1
#>
#> $extraAttributes$countByCommentType$SUBUNIT
#> [1] 1
#>
#> $extraAttributes$countByCommentType$`SUBCELLULAR LOCATION`
#> [1] 1
#>
#> $extraAttributes$countByCommentType$`ALTERNATIVE PRODUCTS`
#> [1] 2
#>
#> $extraAttributes$countByCommentType$`TISSUE SPECIFICITY`
#> [1] 1
#>
#> $extraAttributes$countByCommentType$PTM
#> [1] 1
#>
#> $extraAttributes$countByCommentType$`DISRUPTION PHENOTYPE`
#> [1] 1
#>
#> $extraAttributes$countByCommentType$MISCELLANEOUS
#> [1] 1
#>
#>
#> $extraAttributes$countByFeatureType
#> $extraAttributes$countByFeatureType$`Initiator methionine`
#> [1] 1
#>
#> $extraAttributes$countByFeatureType$Chain
#> [1] 1
#>
#> $extraAttributes$countByFeatureType$Repeat
#> [1] 5
#>
#> $extraAttributes$countByFeatureType$`Zinc finger`
#> [1] 4
#>
#> $extraAttributes$countByFeatureType$Region
#> [1] 19
#>
#> $extraAttributes$countByFeatureType$`Coiled coil`
#> [1] 2
#>
#> $extraAttributes$countByFeatureType$`Compositional bias`
#> [1] 53
#>
#> $extraAttributes$countByFeatureType$`Modified residue`
#> [1] 39
#>
#> $extraAttributes$countByFeatureType$Lipidation
#> [1] 1
#>
#> $extraAttributes$countByFeatureType$Glycosylation
#> [1] 8
#>
#> $extraAttributes$countByFeatureType$`Alternative sequence`
#> [1] 1
#>
#> $extraAttributes$countByFeatureType$`Sequence conflict`
#> [1] 10
#>
#>
#> $extraAttributes$uniParcId
#> [1] "UPI000024E02E"
#>
#>
# }